Research areas
More details about my research and teaching can be found on my personal web page at https://ben-swallow-research.github.io
Selected publications
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Open access
Bayesian hierarchical mixture models for detecting non-normal clusters applied to noisy genomic and environmental datasets
Zhang, H., Swallow, B. & Gupta, M., 1 Aug 2022, In: Australian and New Zealand Journal of Statistics. 64, 2, p. 313-337 25 p.Research output: Contribution to journal › Article › peer-review
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Bayesian inference for stochastic oscillatory systems using the phase-corrected Linear Noise Approximation
Swallow, B., Rand, D. A. & Minas, G., 12 May 2022, (Submitted).Research output: Working paper › Preprint
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Open access
Challenges for modelling interventions for future pandemics
Kretzschmar, M. E., Ashby, B., Fearon, E., Overton, C. E., Panovska-Griffiths, J., Pellis, L., Quaife, M., Rozhnova, G., Scarabel, F., Stage, H. B., Swallow, B., Thompson, R. N., Tildesley, M. J. & Villela, D., 1 Mar 2022, In: Epidemics. 38, 13 p., 100546.Research output: Contribution to journal › Article › peer-review
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Open access
Challenges in estimation, uncertainty quantification and elicitation for pandemic modelling
Swallow, B., Birrell, P., Blake, J., Burgman, M., Challenor, P., Coffeng, L. E., Dawid, P., De Angelis, D., Goldstein, M., Hemming, V., Marion, G., McKinley, T. J., Overton, C. E., Panovska-Griffiths, J., Pellis, L., Probert, W., Shea, K., Villela, D. & Vernon, I., Mar 2022, In: Epidemics. 38, 12 p., 100547.Research output: Contribution to journal › Article › peer-review
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Open access
Combining rapid antigen testing and syndromic surveillance improves community-based COVID-19 detection in a low-income country
Chadwick, F. J., Clark, J., Chowdhury, S., Chowdhury, T., Pascall, D. J., Haddou, Y., Andrecka, J., Kundegorski, M., Wilkie, C., Brum, E., Shirin, T., Alamgir, A. S. M., Rahman, M., Alam, A. N., Khan, F., Swallow, B., Mair, F. S., Illian, J., Trotter, C. L., Hill, D. L., Husmeier, D., Matthiopoulos, J., Hampson, K. & Sania, A., 26 May 2022, In: Nature Communications. 13, 9 p., 2877.Research output: Contribution to journal › Article › peer-review
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Open access
Complex model calibration through emulation, a worked example for a stochastic epidemic model
Dunne, M., Mohammadi, H., Challenor, P., Borgo, R., Porphyre, T., Vernon, I., Firat, E. E., Turkay, C., Torsney-Weir, T., Goldstein, M., Reeve, R., Fang, H. & Swallow, B., Jun 2022, In: Epidemics. 39, 13 p., 100574.Research output: Contribution to journal › Article › peer-review
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Open access
Development and evaluation of two approaches of visual sensitivity analysis to support epidemiological modeling
Rydow, E., Borgo, R., Fang, H., Torsney-weir, T., Swallow, B., Porphyre, T., Turkay, C. & Chen, M., 29 Sep 2022, In: IEEE Transactions on Visualization and Computer Graphics. Early Access, 11 p., 9906007.Research output: Contribution to journal › Article › peer-review
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Open access
Modelling: understanding pandemics and how to control them
Marion, G., Hadley, L., Isham, V., Mollison, D., Panovska-Griffiths, J., Pellis, L., Tomba, G. S., Scarabel, F., Swallow, B., Trapman, P. & Villela, D., 6 Jun 2022, In: Epidemics. 39, 13 p., 100588.Research output: Contribution to journal › Article › peer-review
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Open access
PCP-Ed: parallel coordinate plots for ensemble data
Firat, E., Swallow, B. & Laramee, R., 20 Oct 2022, (E-pub ahead of print) In: Visual Informatics. In Press, 32 p.Research output: Contribution to journal › Article › peer-review
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Open access
Statistical and agent-based modelling of the transmissibility of different SARS-CoV-2 variants in England and impact of different interventions
Panovska-Griffiths, J., Swallow, B., Hinch, R., Cohen, J., Rosenfeld, K., Stuart, R. M., Ferretti, L., Di Lauro, F., Wymant, C., Izzo, A., Waites, W., Viner, R., Bonell, C., Fraser, C., Klein, D., Kerr, C. C. & The COVID-19 Genomics UK (COG-UK) Consortium, 3 Oct 2022, In: Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. 380, 2233, 19 p., 20210315.Research output: Contribution to journal › Article › peer-review