Dr In Um

Research Fellow

Researcher profile

Email

ihu@st-andrews.ac.uk

PhD supervision

• Clare Orange
• Jessie Woon

Selected publications

• Open access

  Kidney tumoroid characterisation by spatial mass spectrometry with same-section multiplex immunofluorescence uncovers tumour microenvironment lipid signatures associated with aggressive tumour phenotypes

  Abdullah, H., Zickuhr, G. M., Um, I. H., Laird, A., Mullen, P., Harrison, D. J. & Dickson, A. L., 16 Sept 2025, In: npj Imaging. 3, p. 1-11 11 p., 43.

  Research output: Contribution to journal › Article › peer-review

• Open access

  Leveraging knowledge for explainable AI in personalized cancer treatment: challenges and future directions

  Daghir-Wojtkowiak, E., Alfaro, J., Mastromattei, M., Palkowski, A., Stares, M., Roca-Umbert, A., Krajnc, A., Leoni, R., Boland, A., Nourbaksh, A., Kallor, A., Ducki, C., Venditti, D., Montesano, C., Cipriani, C., Faria, D., Pflieger, D., Zago, E., Bardet, E. & Serrano, F. & 75 others, Jeanneret, F., Alouges, D., Yin, L., Coquelet, E., Bacquet, A., Bonchi, F., Maiorino, F., Torino, F., Bedran, G., Long, J.-A., Balbi, L., Guyon, L., Bevilacqua, L., Fiorelli, M., Wagner, M.-C., Reyes, M., Roselli, M., Silva, M. C., Waleron, M., Dovrolis, N., Filhol-Cochet, O., Um, I. H., Wolflein, G., Eugénio, P., Bazelle, P., Golnas, P., Thorpe, P., Bove, P., Borole, P., Bernardini, R., Kumar, R., Cicconi, R., Kaltenbrunner, S., Gravina, S., Brezar, S., Symeonides, S., McGinn, S., Nunes, S., Hupp, T., Gordienko, Y., Varvaras, D., Stirenko, S., Xumerle, L., Mariani, S., Bouzit, A., Gazut, S., Poth, H., Souliotis, K., Katifelis, H., Verzoni, E., Procopio, G., Schoch, S., Lupiáñez-Villanueva, F., Türk, S., Barud, K., Koroliouk, D., Caubet, J., Moreno, Y., Descotes, J.-L., Golna, C., Guadalupi, V., Garagnani, P., Gazouli, M., Deleuze, J.-F., Folkvord, F., Forgó, N., Harrison, D. J., Axelson, H., Stellato, A., Mattei, M., Rajan, A., Laird, A., Battail, C., Pesquita, C. & Zanzotto, F. M., 29 Sept 2025, In: Frontiers in Digital Health. 7, p. 1-10 10 p., 104267.

  Research output: Contribution to journal › Article › peer-review

• Open access

  SurGen: 1020 H&E-stained whole slide images with survival and genetic markers

  Myles, C., Um, I., Marshall, C., Harris-Birtill, D. & Harrison, D., 2025, In: GigaScience. 14, p. 1-16 16 p., giaf086.

  Research output: Contribution to journal › Article › peer-review

• Open access

  Defining the mode of action of cisplatin combined with NUC-1031, a phosphoramidate modification of gemcitabine

  Patel, D., Dickson, A., Zickuhr, G. M., Um, I. H., Read, O. J., Melo Czekster, C., Mullen, P., Harrison, D. J. & Bre, J. L., 1 Dec 2024, In: Translational Oncology. 50, 11 p., 102114.

  Research output: Contribution to journal › Article › peer-review

• Open access

  DESI-MSI-guided exploration of metabolic-phenotypic relationships reveals a correlation between PI 38:3 and proliferating cells in clear cell renal cell carcinoma via single-section co-registration of multimodal imaging

  Zickuhr, G. M., Um, I. H., Laird, A., Harrison, D. J. & Dickson, A., Jul 2024, In: Analytical and Bioanalytical Chemistry. 416, 18, p. 4015–4028 14 p.

  Research output: Contribution to journal › Article › peer-review

• Open access

  Kisspeptin is elevated in the brain after intracerebral haemorrhagic stroke

  Maheshwari, S., Um, I. H., Donachie, S., Asghar, N., McDade, K., Millar, T., Harrison, D. J. & Tello, J. A., 30 Dec 2024, In: Scientific Reports. 14, 11 p., 32046.

  Research output: Contribution to journal › Article › peer-review

• Open access

  Leveraging foundation models for enhanced detection of colorectal cancer biomarkers in small datasets

  Myles, C., Um, I. H., Harrison, D. J. & Harris-Birtill, D. C. C., 24 Jul 2024, Medical image understanding and analysis: 28th annual conference, MIUA 2024, Manchester, UK, July 24–26, 2024, proceedings, part I. Yap, M. H., Kendrick, C., Behera, A., Cootes, T. & Zwiggelaar, R. (eds.). Cham: Springer, p. 329-343 (Lecture notes in computer science; vol. 14859).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Open access

  HoechstGAN: virtual lymphocyte staining using generative adversarial networks

  Wolflein, G., Um, I. H., Harrison, D. J. & Arandjelovic, O., 6 Feb 2023, 2023 IEEE/CVF Winter conference on applications of computer vision (WACV). IEEE, p. 4986-4996 11 p. 10030547. (2023 IEEE/CVF Winter conference on applications of computer vision (WACV)).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• MultiPathGAN: structure preserving stain normalization using unsupervised multi-domain adversarial network with perception loss

  Nazki, H., Arandjelović, O., Um, I. H. & Harrison, D., 27 Mar 2023, Proceedings of the 38th ACM/SIGAPP Symposium on Applied Computing (SAC '23). Hong, J., Lanperne, M., Park, J. W., Cerny, T. & Shahriar, H. (eds.). New York, NY: ACM, p. 1197-1204 8 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Open access

  Transcription factor NFE2L1 decreases in glomerulonephropathies after podocyte damage

  Elshani, M., Um, I. H., Leung, S., Reynolds, P. A., Chapman, A., Kudsy, M. & Harrison, D. J., 29 Aug 2023, In: Cells. 12, 17, 2165.

  Research output: Contribution to journal › Article › peer-review

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