Dr In Um

Research Fellow

Researcher profile

Email

ihu@st-andrews.ac.uk

PhD supervision

• Clare Orange
• Jessie Woon

Selected publications

• Open access

  H&E-based MSI/MMR testing with AI in colorectal cancer: a multi-centred blinded evaluation

  Bass, C., Ntelemis, F., Schmidt, J., Wolf, S., Geraldes, A., Mehrotra, D., Singhal, S., Kumar, N., Marcia, A., Bennett, N., Maiques, O., Hyde, M., Mistry, B., Rogerson, G., Cummings, M., Freer, C., Walsh, E., Salto-Tellez, M., Loughrey, M. & Um, I. H. & 8 others, Harrison, D. J., Clarkson, R., Blackwood, J., Barrett, J. C., Kather, J. N., Orsi, N. M., Pandya, P. & Arslan, S., 13 Jan 2026, In: npj Digital Medicine. 9, p. 1-11 44.

  Research output: Contribution to journal › Article › peer-review

• Open access

  Knockout of the intracellular calcium conducting ion channel Mitsugumin 23 (MG23) protects against pressure overload induced left ventricular hypertrophy and cardiac dysfunction

  Dorward, A. M., Robertson, G. B., Sneddon, C., Edel, R. C., O'Rourke, C. L., Um, I. H., Harrison, D. J., Nishi, M., Takeshima, H., Murdoch, C. E. & Pitt, S. J., 31 Jan 2026, In: FASEB Journal. 40, 2, p. 1-16 16 p., e71440.

  Research output: Contribution to journal › Article › peer-review

• Open access

  Multiplexed P21/MCM-2 detection predicts relapse and may identify tyrosine kinase inhibitor-resistant patients in clear cell renal cell carcinoma

  Abdullah, H., Um, I. H., Stewart, G. D., Jeong, C. W., Kwak, C., Moon, K. C., Laird, A., Frangou, E., Eisen, T., Meade, A. & Harrison, D. J., May 2026, In: Cancer Research Communications. 6, 5, p. 1061–1070

  Research output: Contribution to journal › Article › peer-review

• Open access

  Multiplex immunofluorescence and histopathology dataset of cell‐cycle related proteins in renal cell carcinoma

  Abdullah, H., Um, I., Stewart, G. D., Laird, A., Kirkwood, K., Jeong, C. W., Kwak, C., Moon, K. C., TranSORCE Team, Eisen, T., Frangou, E., Warren, A., Meade, A. & Harrison, D. J., 1 Feb 2026, In: Data. 11, 2, p. 1-10 10 p., 27.

  Research output: Contribution to journal › Article › peer-review

• Open access

  Multi-site validation of an AI-based biomarker test for determining ER, PR, and HER2 status from H&E-stained breast cancer slides

  Ntelemis, F., Wolf, S., Bass, C., Geraldes, A., Schmidt, J., Kumar, N., Singhal, S., Mehrotra, D., Marcia, A., Blackwood, J., Maiques, O., Ironside, A., Staves, J. J., Leff, D., Um, I. H., Loane, J., Bryson, G., Harrison, D. J., Khurram, S. A. & Spary, L. & 4 others, Clarkson, R., Kather, J. N., Pandya, P. & Arslan, S., Jun 2026, In: ESMO Real World Data and Digital Oncology. 12, p. 1-9 9 p., 100702.

  Research output: Contribution to journal › Article › peer-review

• Open access

  Cervical whole-slide images dataset for multiclass classification

  Mohammadi, M., Fell, C., Morrison, D., Bell, S., Bryson, G., Syed, S., Konanahalli, P., Harris-Birtill, D., Arandjelovic, O., Orange, C., Shahi, P., Um, I. H., Blackwood, J. D. & Harrison, D. J., 29 Nov 2025, In: GigaScience. 14, p. 1-7 giaf144.

  Research output: Contribution to journal › Article › peer-review

• Open access

  Endometrial whole-slide images dataset for detection of malignancy in endometrial biopsies

  Mohammadi, M., Fell, C., Bell, S., Bryson, G., Syed, S., Konanahalli, P., Harris-Birtill, D., Arandjelovic, O., Orange, C., Shahi, P., Um, I. H., Blackwood, J. D. & Harrison, D. J., 2025, In: GigaScience. 14, p. 1-8 8 p., giaf147.

  Research output: Contribution to journal › Article › peer-review

• Open access

  Kidney tumoroid characterisation by spatial mass spectrometry with same-section multiplex immunofluorescence uncovers tumour microenvironment lipid signatures associated with aggressive tumour phenotypes

  Abdullah, H., Zickuhr, G. M., Um, I. H., Laird, A., Mullen, P., Harrison, D. J. & Dickson, A. L., 16 Sept 2025, In: npj Imaging. 3, p. 1-11 11 p., 43.

  Research output: Contribution to journal › Article › peer-review

• Open access

  Leveraging knowledge for explainable AI in personalized cancer treatment: challenges and future directions

  Daghir-Wojtkowiak, E., Alfaro, J., Mastromattei, M., Palkowski, A., Stares, M., Roca-Umbert, A., Krajnc, A., Leoni, R., Boland, A., Nourbaksh, A., Kallor, A., Ducki, C., Venditti, D., Montesano, C., Cipriani, C., Faria, D., Pflieger, D., Zago, E., Bardet, E. & Serrano, F. & 75 others, Jeanneret, F., Alouges, D., Yin, L., Coquelet, E., Bacquet, A., Bonchi, F., Maiorino, F., Torino, F., Bedran, G., Long, J.-A., Balbi, L., Guyon, L., Bevilacqua, L., Fiorelli, M., Wagner, M.-C., Reyes, M., Roselli, M., Silva, M. C., Waleron, M., Dovrolis, N., Filhol-Cochet, O., Um, I. H., Wolflein, G., Eugénio, P., Bazelle, P., Golnas, P., Thorpe, P., Bove, P., Borole, P., Bernardini, R., Kumar, R., Cicconi, R., Kaltenbrunner, S., Gravina, S., Brezar, S., Symeonides, S., McGinn, S., Nunes, S., Hupp, T., Gordienko, Y., Varvaras, D., Stirenko, S., Xumerle, L., Mariani, S., Bouzit, A., Gazut, S., Poth, H., Souliotis, K., Katifelis, H., Verzoni, E., Procopio, G., Schoch, S., Lupiáñez-Villanueva, F., Türk, S., Barud, K., Koroliouk, D., Caubet, J., Moreno, Y., Descotes, J.-L., Golna, C., Guadalupi, V., Garagnani, P., Gazouli, M., Deleuze, J.-F., Folkvord, F., Forgó, N., Harrison, D. J., Axelson, H., Stellato, A., Mattei, M., Rajan, A., Laird, A., Battail, C., Pesquita, C. & Zanzotto, F. M., 29 Sept 2025, In: Frontiers in Digital Health. 7, p. 1-10 10 p., 104267.

  Research output: Contribution to journal › Article › peer-review

• Open access

  SurGen: 1020 H&E-stained whole slide images with survival and genetic markers

  Myles, C., Um, I., Marshall, C., Harris-Birtill, D. & Harrison, D., 2025, In: GigaScience. 14, p. 1-16 16 p., giaf086.

  Research output: Contribution to journal › Article › peer-review

See more publications