Dr Peter Thorpe

Bioinformatician

Researcher profile

Email

pjt6@st-andrews.ac.uk

Selected publications

• Transcriptional changes in the aphid species Myzus cerasi under different host and environmental conditions

  Thorpe, P., Escudero-Martinez, C. M., Eves-van den Akker, S. & Bos, J. I. B., 13 Jan 2020, In : Insect Molecular Biology. Early View, 12 p.

  Research output: Contribution to journal ? Article

• Metabarcoding reveals a high diversity of woody host-associated Phytophthora spp. in soils at public gardens and amenity woodlands in Britain

  Riddell, C. E., Frederickson-Matika, D., Armstrong, A. C., Elliot, M., Forster, J., Hedley, P. E., Morris, J., Thorpe, P., Cooke, D. EL., Pritchard, L., Sharp, P. M. & Green, S., 16 May 2019, In : PeerJ. 7, e6931.

  Research output: Contribution to journal ? Article

• Extensive Myzus cerasi transcriptional changes associated with detoxification genes upon primary to secondary host alternation

  Thorpe, P., Escudero-Martinez, C., Eves-van den Akker, S. & Bos, J., 2018, In : biorxiv.

  Research output: Contribution to journal ? Article

• Shared transcriptional control and disparate gain and loss of aphid parasitism genes

  Thorpe, P., Escudero-Martinez, C. M., Cock, P. J. A., Eves-van den Akker, S. & Bos, J. I. B., 1 Oct 2018, In : Genome Biology and Evolution. 10, 10, p. 2716-2733

  Research output: Contribution to journal ? Article

• The Phytophthora infestans haustorium is a site for secretion of diverse classes of infection-associated proteins

  Wang, S., Welsh, L., Thorpe, P., Whisson, S. C., Boevink, P. C. & Birch, P. R. J., 28 Aug 2018, In : mBio. 9, 4, 14 p., e01216-18.

  Research output: Contribution to journal ? Article

• The transcriptomes of Xiphinema index and Longidorus elongatus suggest independent acquisition of some plant parasitism genes by horizontal gene transfer in early-branching nematodes

  Danchin, E. G. J., Perfus-Barbeoch, L., Rancurel, C., Thorpe, P., Da Rocha, M., Bajew, S., Neilson, R., Guzeeva, E. S., Da Silva, C., Guy, J., Labadie, K., Esmenjaud, D., Helder, J., Jones, J. T. & den Akker, S. E., 23 Oct 2017, In : Genes. 8, 10, 287.

  Research output: Contribution to journal ? Article

• Translational biology of nematode effectors. Or, to put it another way, functional analysis of effectors ? what?s the point?

  Mantelin, S., Thorpe, P. & Jones, J. T., 2017, In : Nematology. 19, 3, p. 251-261 11 p.

  Research output: Contribution to journal ? Article

• Comparative transcriptomics and proteomics of three different aphid species identifies core and diverse effector sets

  Thorpe, P., Cock, P. J. A. & Bos, J., 2 Mar 2016, In : BMC Genomics. 17, 18 p., 172.

  Research output: Contribution to journal ? Article

• The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence

  Eves-van den Akker, S., Laetsch, D. R., Thorpe, P., Lilley, C. J., Danchin, E. G. J., Da Rocha, M., Rancurel, C., Holroyd, N. E., Cotton, J. A., Szitenberg, A., Grenier, E., Montarry, J., Mimee, B., Duceppe, M-O., Boyes, I., Marvin, J. M. C., Jones, L. M., Yusup, H. B., Lafond-Lapalme, J., Esquibet, M., Sabeh, M., Rott, M., Overmars, H., Finkers-Tomczak, A., Smant, G., Koutsovoulos, G., Blok, V., Mantelin, S., Cock, P. J. A., Phillips, W., Henrissat, B., Urwin, P. E., Blaxter, M. & Jones, J. T., 10 Jun 2016, In : Genome Biology. 17, 23 p., 124.

  Research output: Contribution to journal ? Article

• Only a small subset of the SPRY domain gene family in Globodera pallida is likely to encode effectors, two of which suppress host defences induced by the potato resistance gene Gpa2

  Mei, Y., Thorpe, P., Guzha, A., Haegeman, A., Blok, V. C., MacKenzie, K., Gheysen, G., Jones, J. T. & Mantelin, S., 2015, In : Nematology. 17, 4, p. 409-424 16 p.

  Research output: Contribution to journal ? Article

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